Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii oxidase subunit cbdx | FCU54_11495 | Not Available | Negative | 2387316 - 2387408 | 3597.68 |
| cytochrome d ubiquinol oxidase subunit ii | FCU54_11500 | Not Available | Negative | 2387421 - 2388557 | 42427.3 |
| cytochrome bd-ii oxidase subunit 1 | FCU54_11505 | Not Available | Negative | 2388569 - 2390113 | 57996.3 |
| hydrogenase expression/formation protein | FCU54_11510 | Not Available | Negative | 2390247 - 2391104 | 31446.5 |
| hydrogenase-1 operon protein hyae | FCU54_11515 | Not Available | Negative | 2391101 - 2391499 | 14904.6 |
| hydrogenase 1 maturation protease | FCU54_11520 | Not Available | Negative | 2391496 - 2392083 | 21563.6 |
| ni/fe-hydrogenase b-type cytochrome subunit | FCU54_11525 | Not Available | Negative | 2392080 - 2392787 | 27642.9 |
| ni/fe-hydrogenase large subunit | FCU54_11530 | Not Available | Negative | 2392806 - 2394599 | 66257.0 |
| hydrogenase 1 small subunit | FCU54_11535 | Not Available | Negative | 2394596 - 2395714 | 40683.6 |
| Trna-ser | Not Available | Not Available | Positive | 2396141 - 2396228 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





