Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhfx family plp-dependent enzyme | FCU54_11140 | Not Available | Positive | 2321379 - 2322542 | 42328.9 |
| phosphopentomutase | FCU54_11145 | Not Available | Positive | 2322542 - 2323768 | 44544.2 |
| phosphotriesterase-related protein | FCU54_11150 | Not Available | Positive | 2323765 - 2324643 | 32785.2 |
| duf2620 domain-containing protein | FCU54_11155 | Not Available | Positive | 2324654 - 2325007 | 12479.5 |
| hypothetical protein | FCU54_11160 | Not Available | Positive | 2325019 - 2326323 | 46475.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | FCU54_11165 | Not Available | Positive | 2326335 - 2327420 | 38540.6 |
| duf4223 domain-containing protein | FCU54_11170 | Not Available | Negative | 2327527 - 2327694 | 5819.16 |
| uroporphyrinogen-iii c-methyltransferase | FCU54_11175 | Not Available | Negative | 2327945 - 2329318 | 49954.4 |
| nitrite transporter nirc | FCU54_11180 | Not Available | Negative | 2329337 - 2330143 | 28578.2 |
| nitrite reductase small subunit nird | FCU54_11185 | Not Available | Negative | 2330268 - 2330594 | 12270.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





