Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4049 domain-containing protein | FCU54_10585 | Not Available | Positive | 2197359 - 2198948 | 61015.3 |
| duf4049 domain-containing protein | FCU54_10590 | Not Available | Positive | 2199210 - 2200832 | 61112.8 |
| hlyd family secretion protein | FCU54_10595 | Not Available | Positive | 2201198 - 2202265 | 38861.6 |
| ribosome-associated atpase | FCU54_10600 | Not Available | Positive | 2202262 - 2204997 | 100750.0 |
| abc-2 transporter permease | FCU54_10605 | Not Available | Positive | 2204997 - 2206121 | 41050.2 |
| type ii toxin-antitoxin system hica family toxin | FCU54_10610 | Not Available | Positive | 2206194 - 2206469 | 10186.4 |
| type ii toxin-antitoxin system hicb family antitoxin | FCU54_10615 | Not Available | Positive | 2206466 - 2206825 | 13403.0 |
| nickel-responsive transcriptional regulator nikr | FCU54_10620 | Not Available | Negative | 2206945 - 2207346 | 15094.7 |
| nickel import atp-binding protein nike | FCU54_10625 | Not Available | Negative | 2207351 - 2208157 | 29711.5 |
| nickel import atp-binding protein nikd | FCU54_10630 | Not Available | Negative | 2208154 - 2208918 | 26814.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





