Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfim family lipoprotein | FCU54_10380 | Not Available | Positive | 2154974 - 2155297 | 11720.8 |
| alpha-ketoglutarate permease | FCU54_10385 | Not Available | Negative | 2155294 - 2156592 | 47025.2 |
| acid resistance transcriptional activator gadw | FCU54_10395 | Not Available | Positive | 2158156 - 2158884 | 28002.0 |
| efflux rnd transporter permease subunit | FCU54_10400 | Not Available | Negative | 2159247 - 2162360 | 111524.0 |
| multidrug transporter subunit mdte | FCU54_10405 | Not Available | Negative | 2162385 - 2163542 | 41193.0 |
| hypothetical protein | FCU54_10410 | Not Available | Positive | 2163602 - 2163931 | 11627.0 |
| acid resistance transcriptional activator gade | FCU54_10415 | Not Available | Negative | 2163881 - 2164408 | 20600.6 |
| hded family acid-resistance protein | FCU54_10420 | Not Available | Negative | 2165206 - 2165778 | 20904.7 |
| acid-activated periplasmic chaperone hdea | FCU54_10425 | Not Available | Positive | 2166033 - 2166365 | 11831.2 |
| acid-activated periplasmic chaperone hdeb | FCU54_10430 | Not Available | Positive | 2166481 - 2166807 | 12043.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





