Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intimin-like inverse autotransporter sinh | FCU54_09980 | Not Available | Negative | 2064956 - 2067130 | 81103.1 |
| hypothetical protein | FCU54_09985 | Not Available | Negative | 2067340 - 2067555 | 7702.41 |
| ribosome biogenesis gtpase der | FCU54_09990 | Not Available | Negative | 2067618 - 2069090 | 55012.1 |
| outer membrane protein assembly factor bamb | FCU54_09995 | Not Available | Negative | 2069208 - 2070386 | 41872.6 |
| tetratricopeptide repeat protein | FCU54_10000 | Not Available | Negative | 2070397 - 2071017 | 22177.2 |
| histidine--trna ligase | FCU54_10005 | Not Available | Negative | 2071035 - 2072324 | 47876.3 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | FCU54_10010 | Not Available | Negative | 2072435 - 2073553 | 40686.1 |
| cytoskeleton protein rodz | FCU54_10015 | Not Available | Negative | 2073580 - 2074590 | 36253.7 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | FCU54_10020 | Not Available | Negative | 2074875 - 2076029 | 43088.0 |
| nucleoside-diphosphate kinase | FCU54_10025 | Not Available | Negative | 2076179 - 2076610 | 15437.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





