Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit b | FCU54_09830 | Not Available | Positive | 2021871 - 2023889 | 72681.5 |
| hydrogenase 4 subunit hyfc | FCU54_09835 | Not Available | Positive | 2023900 - 2024847 | 34328.3 |
| hydrogenase 4 subunit d | FCU54_09840 | Not Available | Positive | 2024864 - 2026303 | 51797.7 |
| hydrogenase 4 membrane subunit | FCU54_09845 | Not Available | Positive | 2026315 - 2026965 | 23403.1 |
| hydrogenase 4 subunit f | FCU54_09850 | Not Available | Positive | 2026970 - 2028550 | 56617.4 |
| hydrogenase 4 catalytic subunit hyfg | FCU54_09855 | Not Available | Positive | 2028540 - 2030255 | 65072.1 |
| hydrogenase 4 subunit h | FCU54_09860 | Not Available | Positive | 2030265 - 2030810 | 20143.4 |
| hydrogenase 4 catalytic subunit hyfi | FCU54_09865 | Not Available | Positive | 2030807 - 2031565 | 28074.9 |
| formate hydrogenlyase maturation protein hych | FCU54_09870 | Not Available | Positive | 2031558 - 2031971 | 15579.7 |
| sigma-54-dependent fis family transcriptional regulator | FCU54_09875 | Not Available | Positive | 2032001 - 2034013 | 75309.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





