Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ypfn family protein | FCU54_09780 | Not Available | Positive | 2012844 - 2013044 | 8071.78 |
| esterase | FCU54_09785 | Not Available | Negative | 2013125 - 2013823 | 24801.4 |
| trna(met) cytidine acetyltransferase | FCU54_09790 | Not Available | Negative | 2013897 - 2015912 | 74727.4 |
| neutral zinc metallopeptidase | FCU54_09795 | Not Available | Negative | 2015927 - 2016790 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | FCU54_09800 | Not Available | Negative | 2016958 - 2017671 | 26996.5 |
| outer membrane protein assembly factor bamc | FCU54_09805 | Not Available | Negative | 2017884 - 2018918 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | FCU54_09810 | Not Available | Negative | 2018935 - 2019813 | 31285.9 |
| glycine cleavage system transcriptional repressor | FCU54_09815 | Not Available | Positive | 2019959 - 2020531 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | FCU54_09820 | Not Available | Positive | 2020531 - 2021001 | 17634.9 |
| hydrogenase 4 subunit hyfa | FCU54_09825 | Not Available | Positive | 2021254 - 2021871 | 22173.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





