Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | FCU54_09420 | Not Available | Positive | 1942943 - 1944427 | 54972.1 |
| class i sam-dependent methyltransferase | FCU54_09430 | Not Available | Positive | 1944966 - 1945634 | 24518.5 |
| nucleocapsid protein | FCU54_09435 | Not Available | Negative | 1945579 - 1945716 | 5261.65 |
| hypothetical protein | FCU54_09445 | Not Available | Negative | 1945827 - 1946120 | 10947.5 |
| tail fiber domain-containing protein | FCU54_09450 | Not Available | Negative | 1946131 - 1946835 | 26458.2 |
| hypothetical protein | FCU54_09455 | Not Available | Negative | 1946845 - 1947126 | 10671.5 |
| phage tail protein | FCU54_09460 | Not Available | Negative | 1947126 - 1949498 | 82659.6 |
| hypothetical protein | FCU54_09465 | Not Available | Negative | 1949563 - 1949646 | 2881.29 |
| Trna-lys | Not Available | Not Available | Positive | 1949648 - 1949723 | Not Available |
| lysr family transcriptional regulator | FCU54_09475 | Not Available | Negative | 1949834 - 1950718 | 33582.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





