Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-transpeptidase mrda | FCU54_09065 | Not Available | Positive | 1862485 - 1864386 | 70860.6 |
| peptidoglycan glycosyltransferase mrdb | FCU54_09070 | Not Available | Positive | 1864389 - 1865501 | 40492.6 |
| endolytic peptidoglycan transglycosylase rlpa | FCU54_09075 | Not Available | Positive | 1865512 - 1866600 | 37502.0 |
| d-alanyl-d-alanine carboxypeptidase daca | FCU54_09080 | Not Available | Positive | 1866740 - 1867951 | 44446.5 |
| duf493 family protein | FCU54_09085 | Not Available | Positive | 1868061 - 1868324 | 9827.92 |
| lipoyl(octanoyl) transferase lipb | FCU54_09090 | Not Available | Positive | 1868425 - 1869066 | 23898.0 |
| dna-binding transcriptional regulator | FCU54_09095 | Not Available | Positive | 1869326 - 1870279 | 35867.4 |
| lipoyl synthase | FCU54_09100 | Not Available | Positive | 1870488 - 1871453 | 36073.8 |
| twin-arginine translocase subunit tate | FCU54_09105 | Not Available | Negative | 1871554 - 1871757 | 7024.71 |
| deaminated glutathione amidase | FCU54_09110 | Not Available | Negative | 1871886 - 1872674 | 28664.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





