Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | FCU54_16075 | Not Available | Negative | 3314514 - 3314717 | 7947.8 |
| Putative ninc protein | FCU54_16080 | Not Available | Negative | 3314714 - 3315592 | 33787.7 |
| Hypothetical protein | FCU54_16085 | Not Available | Negative | 3315583 - 3316119 | 20270.6 |
| Hypothetical protein | FCU54_16090 | Not Available | Negative | 3316248 - 3317072 | 30506.2 |
| Hypothetical protein | FCU54_16095 | Not Available | Negative | 3317137 - 3317499 | 13088.6 |
| Prophage repressor | FCU54_16100 | Not Available | Negative | 3317957 - 3318610 | 24168.2 |
| Prophage anti-repressor | FCU54_16105 | Not Available | Positive | 3318706 - 3318903 | 7152.59 |
| Hypothetical protein | FCU54_16110 | Not Available | Positive | 3318931 - 3319515 | 21614.5 |
| Putative antirepressor | FCU54_16115 | Not Available | Positive | 3319691 - 3319903 | 8641.24 |
| Replication protein | FCU54_16120 | Not Available | Positive | 3320484 - 3320852 | 14376.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





