Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate/proton symporter btst | FCU54_07590 | Not Available | Positive | 1566764 - 1568914 | 77371.6 |
| ybdd/yjix family protein | FCU54_07595 | Not Available | Positive | 1568964 - 1569167 | 7729.24 |
| gtpase | FCU54_07600 | Not Available | Positive | 1569178 - 1570134 | 35667.8 |
| brna antitoxin family protein | FCU54_07605 | Not Available | Negative | 1570168 - 1570470 | 11538.6 |
| brnt family toxin | FCU54_07610 | Not Available | Negative | 1570457 - 1570744 | 11224.3 |
| restriction endonuclease | FCU54_07615 | Not Available | Positive | 1570941 - 1572107 | 44257.1 |
| endoribonuclease syme | FCU54_07630 | Not Available | Positive | 1573202 - 1573540 | 12314.7 |
| duf1127 domain-containing protein | FCU54_07635 | Not Available | Negative | 1573582 - 1573746 | 6679.14 |
| plp-dependent aminotransferase family protein | FCU54_07640 | Not Available | Positive | 1573923 - 1575335 | 53121.8 |
| rpn family recombination-promoting nuclease/putative transposase | FCU54_07645 | Not Available | Negative | 1575578 - 1576534 | 37205.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





