Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa:oxalate coa-transferase | FCU54_06885 | Not Available | Negative | 1418443 - 1419588 | 41715.2 |
| transporter yfdv | FCU54_06890 | Not Available | Negative | 1419662 - 1420606 | 33617.9 |
| oxalyl-coa decarboxylase | FCU54_06895 | Not Available | Negative | 1420675 - 1422369 | 60570.8 |
| formyl-coa--oxalate coa-transferase | FCU54_06900 | Not Available | Negative | 1422423 - 1423673 | 45830.7 |
| yfdx family protein | FCU54_06905 | Not Available | Negative | 1424185 - 1424817 | 22875.3 |
| hypothetical protein | FCU54_06910 | Not Available | Positive | 1425113 - 1425388 | 10153.5 |
| duf2545 family protein | FCU54_06915 | Not Available | Negative | 1425465 - 1425707 | 8923.5 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | FCU54_06920 | Not Available | Positive | 1426060 - 1426980 | 35511.5 |
| membrane protein ypdk | FCU54_06925 | Not Available | Positive | 1427336 - 1427407 | 2704.57 |
| alanine transaminase | FCU54_06930 | Not Available | Negative | 1427472 - 1428710 | 46218.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





