Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | FCU54_06400 | Not Available | Positive | 1328965 - 1330971 | 74299.1 |
| yfcl family protein | FCU54_06405 | Not Available | Negative | 1331027 - 1331305 | 10023.6 |
| elongation factor p hydroxylase | FCU54_06410 | Not Available | Negative | 1331339 - 1331887 | 21101.6 |
| hypothetical protein | FCU54_06415 | Not Available | Negative | 1331887 - 1332696 | 28631.2 |
| penicillin-insensitive murein endopeptidase | FCU54_06420 | Not Available | Negative | 1332696 - 1333520 | 30197.5 |
| chorismate synthase | FCU54_06425 | Not Available | Negative | 1333524 - 1334609 | 39153.8 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | FCU54_06430 | Not Available | Negative | 1334644 - 1335576 | 35003.6 |
| endonuclease smrb | FCU54_06435 | Not Available | Positive | 1335742 - 1336293 | 21000.5 |
| hypothetical protein | FCU54_06445 | Not Available | Positive | 1337559 - 1338182 | 23415.7 |
| duf2544 domain-containing protein | FCU54_06450 | Not Available | Negative | 1338231 - 1339070 | 31025.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





