Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent transferase | FCU54_06300 | Not Available | Negative | 1308223 - 1309440 | 45240.7 |
| rpn family recombination-promoting nuclease/putative transposase | FCU54_06305 | Not Available | Negative | 1309747 - 1310649 | 34707.1 |
| histidine abc transporter atp-binding protein hisp | FCU54_06310 | Not Available | Negative | 1310846 - 1311619 | 28626.8 |
| histidine abc transporter permease | FCU54_06315 | Not Available | Negative | 1311627 - 1312343 | 26871.3 |
| abc transporter permease subunit | FCU54_06320 | Not Available | Negative | 1312340 - 1313026 | 24634.8 |
| histidine abc transporter substrate-binding protein hisj | FCU54_06325 | Not Available | Negative | 1313116 - 1313898 | 28484.9 |
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | FCU54_06330 | Not Available | Negative | 1314119 - 1314901 | 28030.1 |
| ubix family flavin prenyltransferase | FCU54_06335 | Not Available | Negative | 1315167 - 1315736 | 20652.2 |
| amidophosphoribosyltransferase | FCU54_06340 | Not Available | Negative | 1315831 - 1317348 | 56505.3 |
| colicin v production protein | FCU54_06345 | Not Available | Negative | 1317385 - 1317873 | 17991.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





