Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin ompc | FCU54_05840 | Not Available | Negative | 1194756 - 1195850 | 40242.1 |
| phosphotransferase rcsd | FCU54_05845 | Not Available | Positive | 1196589 - 1199261 | 100313.0 |
| transcriptional regulator rcsb | FCU54_05850 | Not Available | Positive | 1199278 - 1199928 | 23672.0 |
| two-component system sensor histidine kinase rcsc | FCU54_05855 | Not Available | Negative | 1200013 - 1202862 | 106534.0 |
| two-component system sensor histidine kinase atos | FCU54_05860 | Not Available | Positive | 1203029 - 1204855 | 67808.1 |
| acetoacetate metabolism transcriptional regulator atoc | FCU54_05865 | Not Available | Positive | 1204852 - 1206237 | 52128.5 |
| acetate coa-transferase subunit alpha | FCU54_05870 | Not Available | Positive | 1206433 - 1207095 | 23536.8 |
| succinyl-coa--3-ketoacid-coa transferase | FCU54_05875 | Not Available | Positive | 1207095 - 1207745 | 22975.1 |
| tigr00366 family protein | FCU54_05880 | Not Available | Positive | 1207742 - 1209064 | 47548.7 |
| acetyl-coa c-acetyltransferase | FCU54_05885 | Not Available | Positive | 1209095 - 1210279 | 40341.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





