Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-type protein napg | FCU54_05790 | Not Available | Negative | 1183240 - 1183935 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | FCU54_05795 | Not Available | Negative | 1183942 - 1186428 | 93061.0 |
| chaperone napd | FCU54_05800 | Not Available | Negative | 1186425 - 1186688 | 9473.02 |
| ferredoxin-type protein napf | FCU54_05805 | Not Available | Negative | 1186678 - 1187172 | 18048.3 |
| ecotin | FCU54_05810 | Not Available | Positive | 1187580 - 1188068 | 18180.0 |
| malate dehydrogenase (quinone) | FCU54_05815 | Not Available | Negative | 1188218 - 1189864 | 60247.1 |
| microcin j25 efflux abc transporter yoji | FCU54_05820 | Not Available | Negative | 1190082 - 1191725 | 61586.4 |
| dna oxidative demethylase alkb | FCU54_05825 | Not Available | Negative | 1191801 - 1192451 | 24019.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | FCU54_05830 | Not Available | Negative | 1192451 - 1193515 | 39293.9 |
| fad:protein fmn transferase apbe | FCU54_05835 | Not Available | Negative | 1193589 - 1194644 | 38578.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





