Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna pseudouridine(516) synthase rsua | FCU54_05690 | Not Available | Negative | 1164838 - 1165533 | 25866.8 |
| dead/deah box helicase | FCU54_05695 | Not Available | Positive | 1165683 - 1167443 | 66475.9 |
| 50s ribosomal protein l25 | FCU54_05700 | Not Available | Positive | 1167568 - 1167852 | 10693.1 |
| nucleoid-associated protein yejk | FCU54_05705 | Not Available | Negative | 1167992 - 1168999 | 37825.6 |
| duf1414 domain-containing protein | FCU54_05710 | Not Available | Positive | 1169181 - 1169408 | 8302.98 |
| cardiolipin transport protein pbga | FCU54_05715 | Not Available | Positive | 1169428 - 1171188 | 67299.8 |
| Trna-pro | Not Available | Not Available | Positive | 1171263 - 1171339 | Not Available |
| autotransporter outer membrane beta-barrel domain-containing protein | FCU54_05725 | Not Available | Negative | 1171440 - 1174031 | 91114.0 |
| nitrate/nitrite response regulator protein narp | FCU54_05730 | Not Available | Positive | 1174351 - 1174998 | 23636.5 |
| cytochrome c-type biogenesis protein ccmh | FCU54_05735 | Not Available | Negative | 1175033 - 1176085 | 39091.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





