Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | FCU54_05440 | Not Available | Positive | 1108511 - 1109269 | 28576.1 |
| is110 family transposase | FCU54_05445 | Not Available | Negative | 1109411 - 1110258 | 31629.3 |
| trna dihydrouridine(16) synthase dusc | FCU54_05450 | Not Available | Negative | 1110489 - 1111436 | 35276.7 |
| hypothetical protein | FCU54_05455 | Not Available | Positive | 1111675 - 1112073 | 14579.6 |
| cidb/lrgb family autolysis modulator | FCU54_05460 | Not Available | Positive | 1112070 - 1112765 | 24471.1 |
| cytidine deaminase | FCU54_05465 | Not Available | Positive | 1112895 - 1113779 | 31540.6 |
| outer membrane permeability protein sana | FCU54_05470 | Not Available | Positive | 1113929 - 1114648 | 27288.5 |
| duf2542 family protein | FCU54_05475 | Not Available | Positive | 1114651 - 1114890 | 9298.62 |
| nad(p)-dependent oxidoreductase | FCU54_05480 | Not Available | Positive | 1115084 - 1116322 | 44239.9 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | FCU54_05485 | Not Available | Positive | 1116316 - 1117551 | 45047.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





