Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphatase yhde | FCU54_05290 | Not Available | Negative | 1075287 - 1075880 | 21405.6 |
| rod shape-determining protein mred | FCU54_05295 | Not Available | Negative | 1075889 - 1076377 | 18788.9 |
| rod shape-determining protein mrec | FCU54_05300 | Not Available | Negative | 1076377 - 1077480 | 39513.8 |
| rod shape-determining protein | FCU54_05305 | Not Available | Negative | 1077546 - 1078589 | 36954.7 |
| rnase e specificity factor csrd | FCU54_05310 | Not Available | Negative | 1078894 - 1080834 | 73448.8 |
| oxidoreductase | FCU54_05315 | Not Available | Positive | 1080986 - 1081960 | 34640.9 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | FCU54_05320 | Not Available | Positive | 1082938 - 1083408 | 16688.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | FCU54_05325 | Not Available | Positive | 1083419 - 1084768 | 49323.7 |
| duf4432 family protein | FCU54_05330 | Not Available | Negative | 1084860 - 1085906 | 38648.7 |
| sugar kinase | FCU54_05335 | Not Available | Negative | 1085903 - 1086865 | 34801.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





