Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU54_04635 | Not Available | Positive | 942664 - 942828 | 5921.0 |
| serine dehydratase subunit alpha family protein | FCU54_04640 | Not Available | Negative | 942962 - 944272 | 45290.7 |
| haaap family serine/threonine permease | FCU54_04645 | Not Available | Negative | 944300 - 945631 | 48317.6 |
| l-serine ammonia-lyase | FCU54_04650 | Not Available | Negative | 945906 - 947270 | 48481.5 |
| enamine/imine deaminase | FCU54_04655 | Not Available | Negative | 947342 - 947731 | 14008.0 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | FCU54_04660 | Not Available | Negative | 947745 - 950039 | 85959.4 |
| propionate kinase | FCU54_04665 | Not Available | Negative | 950073 - 951281 | 43353.6 |
| threonine/serine transporter tdcc | FCU54_04670 | Not Available | Negative | 951307 - 952638 | 48895.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | FCU54_04675 | Not Available | Negative | 952660 - 953649 | 35234.5 |
| transcriptional regulator tdca | FCU54_04680 | Not Available | Negative | 953748 - 954686 | 34540.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





