Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC015 16_NODE_101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325611 bp
Thymine Count
1319950 bp
Guanine Count
1317451 bp
Cytosine Count
1366835 bp
Genome Length
5329847 bp
Protein-coding Genes
4868 genes
Non-Coding Genes
285 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate 1-o-acyltransferase plsy | FCU54_04385 | Not Available | Positive | 888128 - 888745 | 22194.7 |
| dna-binding transcriptional activator ttdr | FCU54_04390 | Not Available | Negative | 888758 - 889690 | 35344.7 |
| l(+)-tartrate dehydratase subunit alpha | FCU54_04395 | Not Available | Positive | 889897 - 890808 | 32735.5 |
| l(+)-tartrate dehydratase subunit beta | FCU54_04400 | Not Available | Positive | 890805 - 891410 | 22680.8 |
| anion permease | FCU54_04405 | Not Available | Positive | 891459 - 892922 | 52906.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | FCU54_04410 | Not Available | Negative | 892965 - 893978 | 35952.5 |
| 30s ribosomal protein s21 | FCU54_04415 | Not Available | Positive | 894216 - 894431 | 8500.42 |
| dna primase | FCU54_04420 | Not Available | Positive | 894542 - 896287 | 65568.5 |
| rna polymerase sigma factor rpod | FCU54_04425 | Not Available | Positive | 896482 - 898323 | 70211.2 |
| g/u mismatch-specific dna glycosylase | FCU54_04430 | Not Available | Negative | 898402 - 898908 | 18674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





