Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC035 36_NODE_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175622 bp
Thymine Count
1172987 bp
Guanine Count
1214717 bp
Cytosine Count
1200363 bp
Genome Length
4763689 bp
Protein-coding Genes
4325 genes
Non-Coding Genes
225 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flii/yscn family atpase | FCU15_03465 | Not Available | Positive | 730267 - 731559 | 47573.4 |
| type iii secretion protein | FCU15_03470 | Not Available | Positive | 731549 - 732007 | 18302.4 |
| type iii secretion protein | FCU15_03475 | Not Available | Positive | 731985 - 732860 | 33761.8 |
| yscq/hrcq family type iii secretion apparatus protein | FCU15_03480 | Not Available | Positive | 732860 - 733807 | 36225.4 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | FCU15_03485 | Not Available | Positive | 733797 - 734462 | 24526.4 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | FCU15_03490 | Not Available | Positive | 734472 - 734732 | 9430.85 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | FCU15_03495 | Not Available | Positive | 734734 - 735501 | 28155.7 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | FCU15_03500 | Not Available | Positive | 735498 - 736622 | 43471.5 |
| invasion protein | FCU15_03505 | Not Available | Negative | 736692 - 736958 | 10057.0 |
| helix-turn-helix transcriptional regulator | FCU15_03510 | Not Available | Negative | 736988 - 737488 | 19131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





