Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC035 36_NODE_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175622 bp
Thymine Count
1172987 bp
Guanine Count
1214717 bp
Cytosine Count
1200363 bp
Genome Length
4763689 bp
Protein-coding Genes
4325 genes
Non-Coding Genes
225 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase fad-binding subunit xdhb | FCU15_03415 | Not Available | Negative | 717643 - 718521 | 31560.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | FCU15_03420 | Not Available | Negative | 718532 - 720829 | 82734.1 |
| lysm peptidoglycan-binding domain-containing protein | FCU15_03425 | Not Available | Positive | 721245 - 721997 | 26452.9 |
| Trna-gly | Not Available | Not Available | Positive | 722076 - 722149 | Not Available |
| hypothetical protein | FCU15_03435 | Not Available | Positive | 722382 - 723992 | 60395.6 |
| ghot/ortt family toxin | FCU15_03440 | Not Available | Positive | 724058 - 724237 | 6628.51 |
| helix-turn-helix domain-containing protein | FCU15_03445 | Not Available | Positive | 724583 - 725332 | 28285.5 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | FCU15_03450 | Not Available | Positive | 725329 - 727032 | 62757.4 |
| yopn family type iii secretion system gatekeeper subunit | FCU15_03455 | Not Available | Positive | 727037 - 728182 | 43514.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | FCU15_03460 | Not Available | Positive | 728175 - 730235 | 76435.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





