Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC035 36_NODE_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175622 bp
Thymine Count
1172987 bp
Guanine Count
1214717 bp
Cytosine Count
1200363 bp
Genome Length
4763689 bp
Protein-coding Genes
4325 genes
Non-Coding Genes
225 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | FCU15_16985 | Not Available | Negative | 3508512 - 3508994 | 18000.5 |
| hypothetical protein | FCU15_16990 | Not Available | Negative | 3509018 - 3510370 | 50735.4 |
| type vi secretion system membrane subunit tssm | FCU15_16995 | Not Available | Negative | 3510381 - 3513815 | 130921.0 |
| type vi secretion system protein tssa | FCU15_17000 | Not Available | Negative | 3513924 - 3515336 | 52378.1 |
| type vi secretion system-associated protein tago | FCU15_17005 | Not Available | Negative | 3515341 - 3516084 | 26444.7 |
| type vi secretion system atpase tssh | FCU15_17010 | Not Available | Negative | 3516081 - 3518846 | 100993.0 |
| dotu family type iv/vi secretion system protein | FCU15_17015 | Not Available | Negative | 3518855 - 3519616 | 29350.7 |
| type vi secretion system baseplate subunit tssk | FCU15_17020 | Not Available | Negative | 3519621 - 3520952 | 49909.7 |
| type vi secretion system lipoprotein tssj | FCU15_17025 | Not Available | Negative | 3520955 - 3521479 | 19395.0 |
| type vi secretion system-associated fha domain protein tagh | FCU15_17030 | Not Available | Negative | 3521476 - 3522756 | 47372.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





