Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC035 36_NODE_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175622 bp
Thymine Count
1172987 bp
Guanine Count
1214717 bp
Cytosine Count
1200363 bp
Genome Length
4763689 bp
Protein-coding Genes
4325 genes
Non-Coding Genes
225 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase hrpa | FCU15_13770 | Not Available | Positive | 2845502 - 2849404 | 149036.0 |
| ydcf family protein | FCU15_13775 | Not Available | Positive | 2849676 - 2850476 | 29707.4 |
| aldehyde dehydrogenase | FCU15_13780 | Not Available | Positive | 2850673 - 2852112 | 52275.8 |
| cytochrome b561 | FCU15_13790 | Not Available | Positive | 2853343 - 2853873 | 20287.7 |
| hypothetical protein | FCU15_13795 | Not Available | Positive | 2854118 - 2854291 | 5860.19 |
| type i toxin-antitoxin system toxin hokb | FCU15_13800 | Not Available | Negative | 2854363 - 2854512 | 5626.16 |
| methyl-accepting chemotaxis protein trg | FCU15_13805 | Not Available | Positive | 2854911 - 2856551 | 58930.4 |
| lysr family transcriptional regulator | FCU15_13810 | Not Available | Negative | 2856589 - 2857512 | 33403.6 |
| voc family protein | FCU15_13815 | Not Available | Positive | 2857729 - 2859072 | 51045.6 |
| glucan biosynthesis protein | FCU15_13820 | Not Available | Positive | 2859297 - 2860952 | 62761.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





