Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC035 36_NODE_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1175622 bp
Thymine Count
1172987 bp
Guanine Count
1214717 bp
Cytosine Count
1200363 bp
Genome Length
4763689 bp
Protein-coding Genes
4325 genes
Non-Coding Genes
225 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase dcus | FCU15_13300 | Not Available | Positive | 2741380 - 2743011 | 60554.4 |
| two-component system response regulator dcur | FCU15_13305 | Not Available | Positive | 2743008 - 2743727 | 27489.9 |
| anaerobic c4-dicarboxylate transporter | FCU15_13310 | Not Available | Positive | 2744298 - 2745638 | 47938.2 |
| class i fumarate hydratase | FCU15_13315 | Not Available | Positive | 2745716 - 2747362 | 60108.7 |
| duf2238 domain-containing protein | FCU15_13320 | Not Available | Positive | 2747485 - 2748114 | 23443.4 |
| melibiose:sodium transporter melb | FCU15_13325 | Not Available | Negative | 2748253 - 2749674 | 52639.5 |
| alpha-galactosidase | FCU15_13330 | Not Available | Negative | 2749777 - 2751132 | 50659.9 |
| transcriptional regulator melr | FCU15_13335 | Not Available | Positive | 2751415 - 2752323 | 34929.9 |
| arginine decarboxylase | FCU15_13340 | Not Available | Positive | 2752522 - 2754789 | 84429.8 |
| arac family transcriptional regulator | FCU15_13345 | Not Available | Positive | 2755114 - 2755875 | 29008.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





