Bacillus amyloliquefaciens strain HMA-LCI

Gram-positiveRodMotileAerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus amyloliquefaciens strain HMA-LCI is a Gram-positive, rod-shaped bacterium that thrives in soil environments. This organism is classified as an aerobe, indicating that it requires oxygen for growth. It possesses flagella, which contributes to its mobility, allowing it to navigate its soil habitat effectively. The strain is mesophilic, suggesting that it grows optimally within moderate temperature ranges typically found in temperate environments. B. amyloliquefaciens HMA-LCI has a single replicon and a single membrane structure, characteristics that are common among members of the Bacillus genus. This bacterium is also noted for its ability to sporulate, a process that enables it to survive in adverse conditions by forming resistant spores. In terms of ecological relationships, B. amyloliquefaciens HMA-LCI is free-living and has been associated with various hosts, including Homo sapiens, Triticum aestivum (wheat), Oryza sativa (rice), and Salmo salar (Atlantic salmon). This association with multiple species highlights its potential significance in agricultural and ecological contexts. Overall, the presence of Bacillus amyloliquefaciens strain HMA-LCI in soil ecosystems may play a crucial role in nutrient cycling and plant health, potentially benefiting crop production and soil quality through its interactions with various hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus amyloliquefaciens
Strainstrain HMA-LCI

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Bacillus amyloliquefaciens strain HMA-LCI
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipFree living
Host(s)Homo sapiens, Triticum aestivum, Oryza sativa
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacillus amyloliquefaciens strain HMA-LCI

Gene Summary

Adenine Count

1070497 bp

Thymine Count

1044536 bp

Guanine Count

944250 bp

Cytosine Count

920447 bp

Genome Length

3979730 bp

Protein-coding Genes

3750 genes

Non-Coding Genes

203 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate isomerase/epimeraseFA037_00310Not AvailablePositive67330 - 6819933306.8
2-keto-myo-inositol isomeraseFA037_00315Not AvailablePositive68287 - 6912932043.1
class ii fructose-1,6-bisphosphate aldolaseFA037_00320Not AvailablePositive69132 - 7000431303.5
response regulator transcription factorFA037_00325Not AvailablePositive70112 - 7080126546.7
hamp domain-containing histidine kinaseFA037_00330Not AvailablePositive70798 - 7177538105.9
abc transporter atp-binding proteinFA037_00335Not AvailablePositive71919 - 7269228683.7
abc transporter permeaseFA037_00340Not AvailablePositive72667 - 7453570551.7
yxea family proteinFA037_00345Not AvailablePositive74549 - 7489612988.6
iron-hydroxamate abc transporter substrate-binding proteinFA037_00350Not AvailableNegative74937 - 7589935627.9
hypothetical proteinFA037_00355Not AvailablePositive76029 - 7642115122.9

Displaying genes 211 – 220 of 3953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.