Sphingobacterium olei strain HAL-9

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium olei strain HAL-9 is a rod-shaped bacterium characterized by a single replicon. The strain is cataloged under the accession number SUME00000000.1. Sphingobacterium species are known for their ability to degrade complex organic compounds, which can be significant for bioremediation processes. The rod shape of Sphingobacterium olei strain HAL-9 may influence its motility and survival in various environments, potentially affecting its ecological role in soil and aquatic systems. The presence of a single replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in metabolic processes. Understanding the genomic structure and capabilities of Sphingobacterium olei strain HAL-9 could provide insight into its ecological functions, particularly in nutrient cycling and organic matter degradation. In summary, Sphingobacterium olei strain HAL-9's rod shape and single replicon status highlight its potential as a functional microorganism in various ecological niches, particularly in bioremediation applications where the breakdown of organic pollutants is essential.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium olei
Strainstrain HAL-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium olei strain HAL-9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium olei strain HAL-9 Scaffold27, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4343 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorFAZ15_19550Not AvailablePositive4763758 - 4766805112888.0
ragb/susd family nutrient uptake outer membrane proteinFAZ15_19555Not AvailablePositive4766865 - 476842158886.9
hypothetical proteinFAZ15_19560Not AvailablePositive4768439 - 476958141403.9
glycosyltransferaseFAZ15_19565Not AvailablePositive4769553 - 477078246401.2
glycosyl hydrolase family 76FAZ15_19570Not AvailablePositive4770788 - 477196644976.3
glycoside hydrolase family 92 proteinFAZ15_19575Not AvailablePositive4771993 - 477435988163.4
hypothetical proteinFAZ15_19580Not AvailablePositive4774387 - 4778736164613.0
Trna-lysNot AvailableNot AvailablePositive4778940 - 4779015Not Available
peptide chain release factor n(5)-glutamine methyltransferaseFAZ15_19590Not AvailableNegative4779218 - 478009033137.6
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdFAZ15_19595Not AvailablePositive4780146 - 478120139311.2

Displaying genes 3851 – 3860 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.