Sphingobacterium olei strain HAL-9

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium olei strain HAL-9 is a rod-shaped bacterium characterized by a single replicon. The strain is cataloged under the accession number SUME00000000.1. Sphingobacterium species are known for their ability to degrade complex organic compounds, which can be significant for bioremediation processes. The rod shape of Sphingobacterium olei strain HAL-9 may influence its motility and survival in various environments, potentially affecting its ecological role in soil and aquatic systems. The presence of a single replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in metabolic processes. Understanding the genomic structure and capabilities of Sphingobacterium olei strain HAL-9 could provide insight into its ecological functions, particularly in nutrient cycling and organic matter degradation. In summary, Sphingobacterium olei strain HAL-9's rod shape and single replicon status highlight its potential as a functional microorganism in various ecological niches, particularly in bioremediation applications where the breakdown of organic pollutants is essential.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium olei
Strainstrain HAL-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium olei strain HAL-9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium olei strain HAL-9 Scaffold27, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4343 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinFAZ15_18695Not AvailableNegative4552768 - 455345426040.8
ubid family decarboxylaseFAZ15_18700Not AvailableNegative4553735 - 455557368062.7
hypothetical proteinFAZ15_18705Not AvailableNegative4555650 - 455651033784.2
deoxyribodipyrimidine photolyaseFAZ15_18710Not AvailablePositive4556685 - 455785445586.2
cbs domain-containing proteinFAZ15_18715Not AvailableNegative4557858 - 455976573367.6
3'-5' exonucleaseFAZ15_18720Not AvailableNegative4559762 - 456047527570.6
2-oxoglutarate dehydrogenase e1 componentFAZ15_18725Not AvailablePositive4560828 - 4563566103643.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseFAZ15_18730Not AvailablePositive4563765 - 456500044325.2
gtra family proteinFAZ15_18735Not AvailablePositive4565057 - 456545815496.0
glycosyltransferase family 39 proteinFAZ15_18740Not AvailablePositive4565458 - 456717368003.0

Displaying genes 3681 – 3690 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.