Sphingobacterium olei strain HAL-9

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium olei strain HAL-9 is a rod-shaped bacterium characterized by a single replicon. The strain is cataloged under the accession number SUME00000000.1. Sphingobacterium species are known for their ability to degrade complex organic compounds, which can be significant for bioremediation processes. The rod shape of Sphingobacterium olei strain HAL-9 may influence its motility and survival in various environments, potentially affecting its ecological role in soil and aquatic systems. The presence of a single replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in metabolic processes. Understanding the genomic structure and capabilities of Sphingobacterium olei strain HAL-9 could provide insight into its ecological functions, particularly in nutrient cycling and organic matter degradation. In summary, Sphingobacterium olei strain HAL-9's rod shape and single replicon status highlight its potential as a functional microorganism in various ecological niches, particularly in bioremediation applications where the breakdown of organic pollutants is essential.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium olei
Strainstrain HAL-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium olei strain HAL-9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium olei strain HAL-9 Scaffold27, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4343 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tail fiber domain-containing proteinFAZ15_16545Not AvailablePositive4063087 - 406351515756.8
Trna-glyNot AvailableNot AvailablePositive4063709 - 4063781Not Available
Trna-leuNot AvailableNot AvailablePositive4063787 - 4063874Not Available
ligase-associated dna damage response endonuclease pdemFAZ15_16560Not AvailableNegative4063959 - 406460624689.3
ligase-associated dna damage response dexh box helicaseFAZ15_16565Not AvailableNegative4064599 - 406703492613.9
atp-dependent dna ligaseFAZ15_16570Not AvailableNegative4067018 - 406862261862.9
ligase-associated dna damage response exonucleaseFAZ15_16575Not AvailableNegative4068619 - 406962337871.9
general stress proteinFAZ15_16580Not AvailableNegative4069627 - 407013019100.5
had family phosphataseFAZ15_16585Not AvailablePositive4070268 - 407092724658.5
sulfite exporter taue/safe family proteinFAZ15_16590Not AvailablePositive4070927 - 407169428121.2

Displaying genes 3261 – 3270 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.