Sphingobacterium olei strain HAL-9

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium olei strain HAL-9 is a rod-shaped bacterium characterized by a single replicon. The strain is cataloged under the accession number SUME00000000.1. Sphingobacterium species are known for their ability to degrade complex organic compounds, which can be significant for bioremediation processes. The rod shape of Sphingobacterium olei strain HAL-9 may influence its motility and survival in various environments, potentially affecting its ecological role in soil and aquatic systems. The presence of a single replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in metabolic processes. Understanding the genomic structure and capabilities of Sphingobacterium olei strain HAL-9 could provide insight into its ecological functions, particularly in nutrient cycling and organic matter degradation. In summary, Sphingobacterium olei strain HAL-9's rod shape and single replicon status highlight its potential as a functional microorganism in various ecological niches, particularly in bioremediation applications where the breakdown of organic pollutants is essential.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium olei
Strainstrain HAL-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium olei strain HAL-9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium olei strain HAL-9 Scaffold27, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4343 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ompa family proteinFAZ15_12105Not AvailablePositive2950721 - 295246664791.1
chat domain-containing proteinFAZ15_12110Not AvailableNegative2952622 - 295518998123.7
pkd domain-containing proteinFAZ15_12115Not AvailableNegative2955195 - 295720174981.6
rna polymerase sigma factorFAZ15_12120Not AvailablePositive2957283 - 295785522332.9
hypothetical proteinFAZ15_12125Not AvailablePositive2957883 - 295860227286.2
gh3 auxin-responsive promoter family proteinFAZ15_12130Not AvailableNegative2958607 - 296012458215.9
lps export abc transporter atp-binding proteinFAZ15_12135Not AvailableNegative2960149 - 296088327507.4
single-stranded-dna-specific exonuclease recjFAZ15_12140Not AvailableNegative2961151 - 296285163703.5
mbl fold metallo-hydrolaseFAZ15_12145Not AvailablePositive2962967 - 296374929725.8
ycei family proteinFAZ15_12150Not AvailableNegative2963771 - 296434020602.1

Displaying genes 2391 – 2400 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.