Sphingobacterium olei strain HAL-9

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium olei strain HAL-9 is a rod-shaped bacterium characterized by a single replicon. The strain is cataloged under the accession number SUME00000000.1. Sphingobacterium species are known for their ability to degrade complex organic compounds, which can be significant for bioremediation processes. The rod shape of Sphingobacterium olei strain HAL-9 may influence its motility and survival in various environments, potentially affecting its ecological role in soil and aquatic systems. The presence of a single replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in metabolic processes. Understanding the genomic structure and capabilities of Sphingobacterium olei strain HAL-9 could provide insight into its ecological functions, particularly in nutrient cycling and organic matter degradation. In summary, Sphingobacterium olei strain HAL-9's rod shape and single replicon status highlight its potential as a functional microorganism in various ecological niches, particularly in bioremediation applications where the breakdown of organic pollutants is essential.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium olei
Strainstrain HAL-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium olei strain HAL-9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium olei strain HAL-9 Scaffold27, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4343 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseFAZ15_10775Not AvailablePositive2601875 - 260290337065.1
bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydrataseFAZ15_10780Not AvailablePositive2602923 - 260432351720.8
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseFAZ15_10785Not AvailablePositive2604334 - 260512828828.8
atp-binding cassette domain-containing proteinFAZ15_10790Not AvailablePositive2605145 - 260576523708.4
elongation factor pFAZ15_10795Not AvailablePositive2605842 - 260640221127.9
5-formyltetrahydrofolate cyclo-ligaseFAZ15_10800Not AvailablePositive2606492 - 260706722572.1
phosphoserine phosphataseFAZ15_10805Not AvailableNegative2607106 - 260840149247.3
nad-dependent epimerase/dehydratase family proteinFAZ15_10810Not AvailableNegative2608410 - 260938735997.6
arginaseFAZ15_10815Not AvailablePositive2609553 - 261074045147.4
dna recombination protein rmucFAZ15_10820Not AvailablePositive2610754 - 261207650792.0

Displaying genes 2131 – 2140 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.