Nocardioides sp. GY 10113

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. GY 10113 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number STGK00000000.1, which allows for further genetic and genomic analysis. As a member of the Nocardioides genus, this species likely shares traits with other members known for their role in the degradation of complex organic materials, particularly in soil and terrestrial ecosystems. The single replicon may suggest a more efficient replication process, which could be advantageous in fluctuating environmental conditions. Biologically, Nocardioides species are often associated with the breakdown of various organic compounds, including those found in pollutants, which positions them as potential agents for bioremediation. Their ability to thrive in diverse environments suggests that Nocardioides sp. GY 10113 could play a significant role in nutrient cycling and soil health. In summary, Nocardioides sp. GY 10113, with its single replicon and genomic identification, represents not only a unique microbial entity but also exemplifies the ecological importance of its genus in organic matter degradation and environmental sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. GY 10113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. GY 10113 Scaffold37_1, whole genome shotgun

Gene Summary

Adenine Count

616105 bp

Thymine Count

616306 bp

Guanine Count

1639899 bp

Cytosine Count

1644209 bp

Genome Length

4516519 bp

Protein-coding Genes

4024 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mbl fold metallo-hydrolaseE8D34_16865Not AvailableNegative3681172 - 368188224925.5
duf349 domain-containing proteinE8D34_16870Not AvailablePositive3681929 - 368315545678.3
hypothetical proteinE8D34_16875Not AvailablePositive3683242 - 368374818236.3
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseE8D34_16880Not AvailableNegative3683836 - 368610684365.3
adenine phosphoribosyltransferaseE8D34_16885Not AvailableNegative3686186 - 368672818412.5
protein translocase subunit secfE8D34_16890Not AvailableNegative3686736 - 368797444182.7
protein translocase subunit secdE8D34_16895Not AvailableNegative3687974 - 368974061618.9
preprotein translocase subunit yajcE8D34_16900Not AvailableNegative3689745 - 369008012255.6
holliday junction branch migration dna helicase ruvbE8D34_16905Not AvailableNegative3690257 - 369134238919.7
holliday junction branch migration protein ruvaE8D34_16910Not AvailableNegative3691357 - 369196520780.1

Displaying genes 3341 – 3350 of 4079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.