Nocardioides sp. GY 10113

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. GY 10113 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number STGK00000000.1, which allows for further genetic and genomic analysis. As a member of the Nocardioides genus, this species likely shares traits with other members known for their role in the degradation of complex organic materials, particularly in soil and terrestrial ecosystems. The single replicon may suggest a more efficient replication process, which could be advantageous in fluctuating environmental conditions. Biologically, Nocardioides species are often associated with the breakdown of various organic compounds, including those found in pollutants, which positions them as potential agents for bioremediation. Their ability to thrive in diverse environments suggests that Nocardioides sp. GY 10113 could play a significant role in nutrient cycling and soil health. In summary, Nocardioides sp. GY 10113, with its single replicon and genomic identification, represents not only a unique microbial entity but also exemplifies the ecological importance of its genus in organic matter degradation and environmental sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. GY 10113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. GY 10113 Scaffold37_1, whole genome shotgun

Gene Summary

Adenine Count

616105 bp

Thymine Count

616306 bp

Guanine Count

1639899 bp

Cytosine Count

1644209 bp

Genome Length

4516519 bp

Protein-coding Genes

4024 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar biosynthetic protein flirE8D34_15505Not AvailablePositive3368193 - 336896926549.7
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinE8D34_15510Not AvailablePositive3368985 - 337015742422.5
phosphoribosylformylglycinamidine synthase subunit purqE8D34_15515Not AvailableNegative3370238 - 337090623382.8
phosphoribosylformylglycinamidine synthase subunit pursE8D34_15520Not AvailableNegative3370903 - 33711488813.68
hypothetical proteinE8D34_15525Not AvailablePositive3371263 - 337174517334.3
phosphoribosylaminoimidazolesuccinocarboxamide synthaseE8D34_15530Not AvailableNegative3371755 - 337266632717.8
hypothetical proteinE8D34_15535Not AvailablePositive3372804 - 337316613101.4
antibiotic biosynthesis monooxygenaseE8D34_15540Not AvailablePositive3373300 - 337362011389.4
aromatic ring-opening dioxygenase ligaE8D34_15545Not AvailableNegative3373684 - 337414215699.8
abc transporter substrate-binding proteinE8D34_15550Not AvailableNegative3374335 - 337631169853.3

Displaying genes 3071 – 3080 of 4079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.