Nocardioides sp. GY 10113

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. GY 10113 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number STGK00000000.1, which allows for further genetic and genomic analysis. As a member of the Nocardioides genus, this species likely shares traits with other members known for their role in the degradation of complex organic materials, particularly in soil and terrestrial ecosystems. The single replicon may suggest a more efficient replication process, which could be advantageous in fluctuating environmental conditions. Biologically, Nocardioides species are often associated with the breakdown of various organic compounds, including those found in pollutants, which positions them as potential agents for bioremediation. Their ability to thrive in diverse environments suggests that Nocardioides sp. GY 10113 could play a significant role in nutrient cycling and soil health. In summary, Nocardioides sp. GY 10113, with its single replicon and genomic identification, represents not only a unique microbial entity but also exemplifies the ecological importance of its genus in organic matter degradation and environmental sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. GY 10113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. GY 10113 Scaffold37_1, whole genome shotgun

Gene Summary

Adenine Count

616105 bp

Thymine Count

616306 bp

Guanine Count

1639899 bp

Cytosine Count

1644209 bp

Genome Length

4516519 bp

Protein-coding Genes

4024 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent dna ligase ligaE8D34_06595Not AvailablePositive1441522 - 144361875376.3
nad-dependent succinate-semialdehyde dehydrogenaseE8D34_06600Not AvailableNegative1443708 - 144505147342.8
abc transporter permeaseE8D34_06605Not AvailableNegative1445097 - 144590329002.1
abc transporter permeaseE8D34_06610Not AvailableNegative1445922 - 144685133280.4
abc transporter substrate-binding proteinE8D34_06615Not AvailableNegative1446916 - 144812143430.9
abc transporter atp-binding proteinE8D34_06620Not AvailableNegative1448154 - 144929640990.9
fadr family transcriptional regulatorE8D34_06625Not AvailablePositive1449488 - 145027328065.2
hypothetical proteinE8D34_06630Not AvailablePositive1450270 - 145102226589.5
amino acid permeaseE8D34_06635Not AvailableNegative1451050 - 145257053385.8
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcE8D34_06640Not AvailablePositive1452780 - 145309411184.1

Displaying genes 1311 – 1320 of 4079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.