Nocardioides sp. GY 10113

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides sp. GY 10113 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number STGK00000000.1, which allows for further genetic and genomic analysis. As a member of the Nocardioides genus, this species likely shares traits with other members known for their role in the degradation of complex organic materials, particularly in soil and terrestrial ecosystems. The single replicon may suggest a more efficient replication process, which could be advantageous in fluctuating environmental conditions. Biologically, Nocardioides species are often associated with the breakdown of various organic compounds, including those found in pollutants, which positions them as potential agents for bioremediation. Their ability to thrive in diverse environments suggests that Nocardioides sp. GY 10113 could play a significant role in nutrient cycling and soil health. In summary, Nocardioides sp. GY 10113, with its single replicon and genomic identification, represents not only a unique microbial entity but also exemplifies the ecological importance of its genus in organic matter degradation and environmental sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides sp. GY 10113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides sp. GY 10113 Scaffold37_1, whole genome shotgun

Gene Summary

Adenine Count

616105 bp

Thymine Count

616306 bp

Guanine Count

1639899 bp

Cytosine Count

1644209 bp

Genome Length

4516519 bp

Protein-coding Genes

4024 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilt/pilu family type 4a pilus atpaseE8D34_05795Not AvailablePositive1261979 - 126309440074.4
type ii secretion system f family proteinE8D34_05800Not AvailablePositive1263105 - 126431644045.5
hypothetical proteinE8D34_05805Not AvailablePositive1264169 - 126560549858.3
hypothetical proteinE8D34_05810Not AvailablePositive1265602 - 126636626565.9
hypothetical proteinE8D34_05815Not AvailablePositive1266363 - 126810562497.0
prepilin-type n-terminal cleavage/methylation domain-containing proteinE8D34_05820Not AvailablePositive1268234 - 126868015336.9
hypothetical proteinE8D34_05825Not AvailablePositive1268837 - 126958326469.6
flia/whig family rna polymerase sigma factorE8D34_05830Not AvailablePositive1269610 - 127035027047.2
dmt family transporterE8D34_05835Not AvailableNegative1270395 - 127129430514.9
response regulator transcription factorE8D34_05840Not AvailableNegative1271419 - 127209625261.4

Displaying genes 1151 – 1160 of 4079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.