Klebsiella pneumoniae strain SIKP065 70_NODE_73

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain SIKP065 is a Gram-negative bacterium with a rod shape, often arranged in chains, pairs, or singles. It is classified as a facultative anaerobe and is capable of movement, possessing flagella. This strain thrives optimally at 37°C, falling within the mesophilic temperature range. It is a chemoheterotroph, indicating it derives energy from organic compounds. This bacterial strain is notably associated with a diverse array of hosts, including Homo sapiens, various species of birds (Gallus gallus and Phasianidae), mammals (Canis lupus familiaris, Ovis aries, Sus scrofa, and Equidae), amphibians, and fish (Danio rerio). Its presence in such a wide range of hosts underscores its ecological adaptability and potential for cross-species transmission. SIKP065 is recognized for its pathogenicity in humans, being implicated in numerous health conditions, including bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. The strain is nonsporulating and possesses a single replicon and two membranes, characteristic of its cell envelope structure. The diverse health effects associated with Klebsiella pneumoniae strain SIKP065 reflect its significant role as a human pathogen, often leading to severe infections such as sepsis and pneumonia. The strain’s free-living biotic relationship suggests its environmental persistence, which may facilitate its transmission and increase the risk of infections in susceptible hosts, particularly in healthcare settings. Understanding the ecology and pathogenicity of this strain is crucial for addressing the challenges it poses in clinical microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain SIKP065 70_NODE_73

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain SIKP065 70_NODE_73
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain SIKP065 70_NODE_73, whole genome

Gene Summary

Adenine Count

1151095 bp

Thymine Count

1154161 bp

Guanine Count

1553263 bp

Cytosine Count

1544963 bp

Genome Length

5403482 bp

Protein-coding Genes

4971 genes

Non-Coding Genes

360 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide exchange factor grpeFAO24_25605Not AvailableNegative5160641 - 516123121751.9
nad(+) kinaseFAO24_25610Not AvailablePositive5161356 - 516223432396.0
dna repair protein recnFAO24_25615Not AvailablePositive5162321 - 516398261311.2
outer membrane protein assembly factor bameFAO24_25620Not AvailablePositive5164130 - 516447112414.0
rnfh family proteinFAO24_25625Not AvailableNegative5164538 - 516482810821.0
type ii toxin-antitoxin system rata family toxinFAO24_25630Not AvailableNegative5164818 - 516529417439.3
ssra-binding protein smpbFAO24_25635Not AvailablePositive5165405 - 516588718240.1
Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacgaNot AvailableNot AvailablePositive5166032 - 5166394Not Available
duf4102 domain-containing proteinFAO24_25645Not AvailablePositive5166518 - 516778947903.3
hypothetical proteinFAO24_25650Not AvailablePositive5168142 - 516881926365.2

Displaying genes 5071 – 5080 of 5331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total