Klebsiella pneumoniae strain SIKP097 105_NODE_123

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain SIKP097 (accession SSZQ00000000.1) is a Gram-negative, mesophilic bacterium that thrives at an optimal temperature of 37°C. This strain exhibits a rod shape and is capable of mobility due to the presence of flagella. It is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic environments. The organism is chemoheterotrophic, deriving energy from organic compounds. K. pneumoniae SIKP097 typically appears in various arrangements, including chains, pairs, and singles. It possesses a unique biotic relationship, being free-living while also being host-associated, indicating its ability to inhabit diverse environments, including various animal and plant hosts. Reported hosts include Homo sapiens, Gallus gallus, and multiple other species across the animal kingdom, such as Canis lupus familiaris and Sus scrofa, as well as some plants (Viridiplantae). This strain is notably pathogenic to humans, associated with several severe health conditions, including bacteremia, pneumonia, urinary tract infections, and sepsis. The extensive list of health effects underscores its clinical significance and ability to cause a range of infections, from urinary tract infections to more severe conditions like meningitis and liver abscesses. In summary, Klebsiella pneumoniae strain SIKP097 highlights the complex interplay between microbial life and host organisms. Its capacity for pathogenicity in humans and other species illustrates the importance of understanding microbial ecology, particularly in developing strategies for infection control and treatment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain SIKP097 105_NODE_123

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain SIKP097 105_NODE_123
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain SIKP097 105_NODE_123, whole genome

Gene Summary

Adenine Count

1241559 bp

Thymine Count

1243358 bp

Guanine Count

1627522 bp

Cytosine Count

1637848 bp

Genome Length

5750287 bp

Protein-coding Genes

5306 genes

Non-Coding Genes

281 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinFAO20_19770Not AvailablePositive4043259 - 404357311786.1
LysinFAO20_19775Not AvailablePositive4043576 - 404407918428.4
Putative rz lytic proteinFAO20_19780Not AvailablePositive4044076 - 404445313594.2
Putative rz1 lytic proteinFAO20_19785Not AvailablePositive4044434 - 40446196666.04
Terminase small subunitFAO20_19790Not AvailablePositive4044985 - 404558722347.6
Terminase large subunitFAO20_19795Not AvailablePositive4045587 - 404705956579.0
Portal proteinFAO20_19800Not AvailablePositive4047072 - 404853553622.9
Phage head morphogenesisFAO20_19805Not AvailablePositive4048468 - 404946937650.4
hypothetical proteinFAO20_19810Not AvailableNegative4049462 - 40496627265.65
Hypothetical proteinFAO20_19815Not AvailablePositive4049740 - 405109549402.4

Displaying genes 61 – 70 of 5587 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total