Klebsiella pneumoniae subsp. pneumoniae strain SIKP002 2_NODE_102

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae subsp. pneumoniae strain SIKP002 (accession SSZM00000000.1) is a Gram-negative bacterium characterized as a chemoheterotroph, utilizing organic compounds for energy. This strain is mesophilic, with an optimal growth temperature of 37°C, making it well-suited for colonization in warm-blooded hosts. Its cellular morphology is that of rod-shaped organisms that can exist in various arrangements, including singles, pairs, and chains. This bacterium is facultatively anaerobic, indicating its ability to grow in both the presence and absence of oxygen. It possesses flagella, which contribute to its mobility, allowing it to navigate its environment effectively. With a single replicon and a double membrane structure, SIKP002 aligns with the typical characteristics of many members of the Enterobacteriaceae family. Klebsiella pneumoniae subsp. pneumoniae is notably associated with significant health concerns, particularly as a causative agent of pneumonia, including community-acquired pneumonia (CAP). Its free-living biotic relationship suggests it can thrive independently in various environments, although its primary habitat is associated with hosts. Understanding the ecological role of SIKP002 provides insight into its adaptability and pathogenic potential. Its presence in host-associated environments highlights its significance in human health, particularly in respiratory infections. This strain exemplifies the dual nature of certain bacteria, acting as both free-living organisms and opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainsubsp. pneumoniae strain SIKP002 2_NODE_102

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae subsp. pneumoniae strain SIKP002 2_NODE_102
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Klebsiella pneumoniae subsp. pneumoniae strain SIKP002 2_NODE_102,

Gene Summary

Adenine Count

1172987 bp

Thymine Count

1177768 bp

Guanine Count

1588186 bp

Cytosine Count

1548653 bp

Genome Length

5487594 bp

Protein-coding Genes

5182 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
jab domain-containing proteinFAN59_12240Not AvailablePositive2514007 - 251467225014.5
50s ribosomal protein l28FAN59_12245Not AvailablePositive2514889 - 25151259007.02
50s ribosomal protein l33FAN59_12250Not AvailablePositive2515146 - 25153136405.98
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseFAN59_12255Not AvailablePositive2515449 - 251625830286.8
pantetheine-phosphate adenylyltransferaseFAN59_12260Not AvailableNegative2516447 - 251692617663.6
glycosyltransferase family 2 proteinFAN59_12265Not AvailableNegative2516923 - 251769929270.0
3-deoxy-d-manno-octulosonic acid transferaseFAN59_12270Not AvailableNegative2517699 - 251897347659.4
glycosyltransferaseFAN59_12275Not AvailableNegative2519065 - 252005438843.4
glycosyltransferaseFAN59_12280Not AvailableNegative2520084 - 252117840987.4
glycosyltransferase family 4 proteinFAN59_12285Not AvailableNegative2521181 - 252230842620.6

Displaying genes 2471 – 2480 of 5374 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PneumoniaCausesPMC475056
Community-acquired pneumonia (cap)CausesPMC7609860

Displaying health effects 1 – 2 of 2 in total