Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | K-12 strain SIEC033 34_NODE_141 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195438 bp
Thymine Count
1197170 bp
Guanine Count
1230095 bp
Cytosine Count
1226712 bp
Genome Length
4849415 bp
Protein-coding Genes
4395 genes
Non-Coding Genes
224 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | FAM12_17820 | Not Available | Negative | 3694553 - 3696403 | 71190.0 |
| type vi secretion system baseplate subunit tsse | FAM12_17825 | Not Available | Negative | 3696407 - 3696820 | 15522.1 |
| type vi secretion system contractile sheath large subunit | FAM12_17830 | Not Available | Negative | 3696827 - 3698302 | 55733.1 |
| hypothetical protein | FAM12_17835 | Not Available | Negative | 3698353 - 3698577 | 8411.01 |
| type vi secretion system contractile sheath small subunit | FAM12_17840 | Not Available | Negative | 3698594 - 3699112 | 18772.3 |
| hcp family type vi secretion system effector | FAM12_17845 | Not Available | Positive | 3699807 - 3700325 | 19256.8 |
| type vi secretion system tip protein vgrg | FAM12_17850 | Not Available | Positive | 3700535 - 3702676 | 79703.0 |
| rhs repeat protein | FAM12_17855 | Not Available | Positive | 3702752 - 3706984 | 158780.0 |
| hypothetical protein | FAM12_17860 | Not Available | Positive | 3706962 - 3707354 | 14635.0 |
| isas1 family transposase | FAM12_17865 | Not Available | Positive | 3707785 - 3708921 | 43205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





