Lampropedia aestuarii strain YIM MLB12

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Lampropedia

Description

Lampropedia aestuarii strain YIM MLB12 is a rod-shaped, Gram-negative bacterium that exhibits aerobic metabolism and is classified as a heterotroph. This organism is notable for its mobility, attributed to the presence of flagella, and it typically exists as single cells rather than in clusters or chains. Strain YIM MLB12 thrives in mesophilic temperature ranges, suggesting an optimal growth condition at moderate temperatures. It is characterized by a unique cellular structure composed of two membranes, which is typical of Gram-negative bacteria. Additionally, this strain possesses a single replicon, indicating a streamlined genomic organization. The habitat of Lampropedia aestuarii strain YIM MLB12 is diverse, allowing it to occupy multiple environments. As a free-living organism, it plays an important role in its ecosystem, potentially contributing to nutrient cycling and energy flow within its habitat. The ecological insight into this bacterium’s lifestyle indicates that its heterotrophic nature enables it to utilize organic compounds from its surroundings, which may influence microbial community dynamics and overall ecosystem health. Understanding such traits can provide valuable information for ecological studies and biotechnological applications, particularly in environments where organic matter decomposition is critical.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLampropedia
SpeciesLampropedia aestuarii
Strainstrain YIM MLB12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Lampropedia aestuarii strain YIM MLB12
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Lampropedia aestuarii strain YIM MLB12 Scaffold75, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3378 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box proteinE8K88_16870Not AvailableNegative3935944 - 393643819060.8
hypothetical proteinE8K88_16875Not AvailableNegative3936451 - 393681312540.5
hydroxymethylbilane synthaseE8K88_16880Not AvailablePositive3937261 - 393820533931.0
pseudouridine synthaseE8K88_16885Not AvailableNegative3938247 - 393916734574.6
isopeptide-forming domain-containing fimbrial proteinE8K88_16890Not AvailableNegative3939307 - 393998122116.8
Trna-gluNot AvailableNot AvailablePositive3940153 - 3940227Not Available
Trna-aspNot AvailableNot AvailablePositive3940280 - 3940356Not Available
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeE8K88_16905Not AvailablePositive3940554 - 394159436518.7
multicopper oxidase family proteinE8K88_16910Not AvailableNegative3941860 - 394342857867.7
ygiq family radical sam proteinE8K88_16915Not AvailableNegative3943799 - 394627691706.6

Displaying genes 3321 – 3330 of 3521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.