Lampropedia aestuarii strain YIM MLB12

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Lampropedia

Description

Lampropedia aestuarii strain YIM MLB12 is a rod-shaped, Gram-negative bacterium that exhibits aerobic metabolism and is classified as a heterotroph. This organism is notable for its mobility, attributed to the presence of flagella, and it typically exists as single cells rather than in clusters or chains. Strain YIM MLB12 thrives in mesophilic temperature ranges, suggesting an optimal growth condition at moderate temperatures. It is characterized by a unique cellular structure composed of two membranes, which is typical of Gram-negative bacteria. Additionally, this strain possesses a single replicon, indicating a streamlined genomic organization. The habitat of Lampropedia aestuarii strain YIM MLB12 is diverse, allowing it to occupy multiple environments. As a free-living organism, it plays an important role in its ecosystem, potentially contributing to nutrient cycling and energy flow within its habitat. The ecological insight into this bacterium’s lifestyle indicates that its heterotrophic nature enables it to utilize organic compounds from its surroundings, which may influence microbial community dynamics and overall ecosystem health. Understanding such traits can provide valuable information for ecological studies and biotechnological applications, particularly in environments where organic matter decomposition is critical.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLampropedia
SpeciesLampropedia aestuarii
Strainstrain YIM MLB12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Lampropedia aestuarii strain YIM MLB12
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Lampropedia aestuarii strain YIM MLB12 Scaffold75, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3378 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
elongation factor 4E8K88_00905Not AvailableNegative212054 - 21386266265.4
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseE8K88_00910Not AvailableNegative214147 - 21629179906.2
dna-directed rna polymerase subunit omegaE8K88_00915Not AvailableNegative216571 - 2167747421.1
guanylate kinaseE8K88_00920Not AvailableNegative216861 - 21756225905.8
yicc family proteinE8K88_00925Not AvailableNegative217575 - 21848933656.7
serine/threonine protein kinaseE8K88_00930Not AvailablePositive218602 - 21961237654.6
serine/threonine-protein phosphataseE8K88_00935Not AvailablePositive219663 - 22054132169.9
ribonuclease phE8K88_00940Not AvailablePositive220669 - 22140926479.6
rdgb/ham1 family non-canonical purine ntp pyrophosphataseE8K88_00945Not AvailablePositive221488 - 22209321775.9
iron-sulfur cluster insertion protein erpaE8K88_00950Not AvailableNegative222174 - 22254213010.2

Displaying genes 301 – 310 of 3521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.