Lampropedia aestuarii strain YIM MLB12

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Lampropedia

Description

Lampropedia aestuarii strain YIM MLB12 is a rod-shaped, Gram-negative bacterium that exhibits aerobic metabolism and is classified as a heterotroph. This organism is notable for its mobility, attributed to the presence of flagella, and it typically exists as single cells rather than in clusters or chains. Strain YIM MLB12 thrives in mesophilic temperature ranges, suggesting an optimal growth condition at moderate temperatures. It is characterized by a unique cellular structure composed of two membranes, which is typical of Gram-negative bacteria. Additionally, this strain possesses a single replicon, indicating a streamlined genomic organization. The habitat of Lampropedia aestuarii strain YIM MLB12 is diverse, allowing it to occupy multiple environments. As a free-living organism, it plays an important role in its ecosystem, potentially contributing to nutrient cycling and energy flow within its habitat. The ecological insight into this bacterium’s lifestyle indicates that its heterotrophic nature enables it to utilize organic compounds from its surroundings, which may influence microbial community dynamics and overall ecosystem health. Understanding such traits can provide valuable information for ecological studies and biotechnological applications, particularly in environments where organic matter decomposition is critical.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLampropedia
SpeciesLampropedia aestuarii
Strainstrain YIM MLB12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Lampropedia aestuarii strain YIM MLB12
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Lampropedia aestuarii strain YIM MLB12 Scaffold75, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3378 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
escn/yscn/hrcn family type iii secretion system atpaseE8K88_14625Not AvailablePositive3416230 - 341757048503.2
type iii secretion proteinE8K88_14630Not AvailablePositive3417567 - 341807619883.3
hypothetical proteinE8K88_14635Not AvailablePositive3418073 - 341868121253.0
yscq/hrcq family type iii secretion apparatus proteinE8K88_14640Not AvailablePositive3418629 - 341981642540.8
escr/yscr/hrcr family type iii secretion system export apparatus proteinE8K88_14645Not AvailablePositive3419813 - 342046323757.3
escs/yscs/hrcs family type iii secretion system export apparatus proteinE8K88_14650Not AvailablePositive3420493 - 34207629715.1
esct/ysct/hrct family type iii secretion system export apparatus proteinE8K88_14655Not AvailablePositive3420850 - 342165629012.2
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinE8K88_14660Not AvailablePositive3421649 - 342270738629.1
type iii secretion system chaperoneE8K88_14665Not AvailablePositive3422722 - 342312614632.5
escc/yscc/hrcc family type iii secretion system outer membrane ring proteinE8K88_14670Not AvailablePositive3423165 - 342518371718.4

Displaying genes 2911 – 2920 of 3521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.