Escherichia coli K-12 strain 70 GCID_CRE_0141_NODE_158

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli K-12 strain 70 (GCID_CRE_0141_NODE_158) is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This strain is notable for its ability to thrive in host-associated habitats, indicating a potential association with animal or human hosts. E. coli K-12 strain 70 typically exists in pairs or single arrangements, showcasing its ability to adapt to various environments. This strain possesses one replicon and has a double membrane structure, which is typical for Gram-negative bacteria. It is motile, equipped with flagella that facilitate movement. The optimal growth temperature for E. coli K-12 strain 70 is 37°C, aligning with the mesophilic temperature range, which allows it to thrive in moderate temperature conditions commonly found within mammalian hosts. As a free-living organism, E. coli K-12 strain 70 can exist independently of a host, yet it is often part of a complex microbial community. Its facultative anaerobic nature allows it to utilize oxygen when available but also to survive in oxygen-limited environments. This adaptability is crucial for its survival in varying ecological niches. The insights gained from studying E. coli K-12 strain 70, particularly its versatility in habitat and metabolic capabilities, underscore its significance in both microbiological research and its role in the gut microbiome of hosts. Understanding such traits can inform studies on microbial interactions and the implications for host health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainK-12 strain 70 GCID_CRE_0141_NODE_158

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli K-12 strain 70 GCID_CRE_0141_NODE_158
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli K-12 strain 70 GCID_CRE_0141_NODE_158, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4294 genes

Non-Coding Genes

196 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fructuronate reductaseFAZ87_10120Not AvailableNegative2120392 - 212185253643.4
mannonate dehydrataseFAZ87_10125Not AvailableNegative2121933 - 212311744796.5
gluconate permease gntpFAZ87_10130Not AvailablePositive2123457 - 212480047141.0
is1 family transposaseFAZ87_10140Not AvailablePositive2125200 - 21253264555.41
menaquinone-dependent protoporphyrinogen ix dehydrogenaseFAZ87_10145Not AvailableNegative2125635 - 212618021227.4
trk system potassium transporter trkhFAZ87_10150Not AvailableNegative2126192 - 212764352962.9
impact family proteinFAZ87_10155Not AvailableNegative2127682 - 212829621758.1
xaa-pro dipeptidaseFAZ87_10160Not AvailableNegative2128296 - 212962750178.9
fatty acid oxidation complex subunit alpha fadbFAZ87_10165Not AvailablePositive2129817 - 213200679598.4
acetyl-coa c-acyltransferase fadaFAZ87_10170Not AvailablePositive2132016 - 213317940878.7

Displaying genes 2071 – 2080 of 4492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.