Parvibacter caecicola strain NM48_B13 14

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Coriobacteriia

Order

Coriobacteriales

Family

Coriobacteriaceae

Genus

Parvibacter

Description

Parvibacter caecicola strain NM48_B13 14 is characterized by a single replicon, suggesting a streamlined genomic organization that may contribute to its adaptability in specific environments. Its genomic data is cataloged under the accession number SSTM00000000.1, which serves as a reference for researchers seeking to study this strain further. The singular replicon indicates that Parvibacter caecicola NM48_B13 14 may exhibit features typically associated with species that have a reduced genomic complexity, potentially allowing for efficient replication and maintenance in its ecological niche. Such adaptations could be beneficial in environments where resource availability fluctuates, enabling the organism to thrive under competitive conditions. Understanding the genetic makeup of Parvibacter caecicola NM48_B13 14 can provide insights into its ecological role, particularly in environments where it is prevalent. The study of this strain could inform broader ecological and biological principles concerning microbial interactions and adaptability. The traits of this specific strain highlight the potential for specialized functions within microbial communities, suggesting that even organisms with minimal genomic complexity can play significant roles in their ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassCoriobacteriia
OrderCoriobacteriales
FamilyCoriobacteriaceae
GenusParvibacter
SpeciesParvibacter caecicola
Strainstrain NM48_B13 14

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parvibacter caecicola strain NM48_B13 14, whole genome shotgun

Gene Summary

Adenine Count

449783 bp

Thymine Count

456625 bp

Guanine Count

763976 bp

Cytosine Count

742494 bp

Genome Length

2412878 bp

Protein-coding Genes

1821 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinE5982_02150Not AvailableNegative488532 - 49014258457.1
pyruvate:ferredoxin (flavodoxin) oxidoreductaseE5982_02155Not AvailableNegative490483 - 494016127238.0
rok family proteinE5982_02160Not AvailableNegative494480 - 49585349556.9
n-acylglucosamine 2-epimeraseE5982_02165Not AvailableNegative495855 - 49705446120.4
dihydrodipicolinate synthase family proteinE5982_02170Not AvailableNegative497232 - 49817634270.4
pyridoxamine 5'-phosphate oxidaseE5982_02175Not AvailableNegative498333 - 49876415528.3
energy-coupling factor transporter transmembrane protein ecftE5982_02180Not AvailableNegative498789 - 49958929089.8
energy-coupling factor transporter atpaseE5982_02185Not AvailableNegative499586 - 50051533310.8
energy-coupling factor transporter atpaseE5982_02190Not AvailableNegative500491 - 50133630687.9
ecf transporter s componentE5982_02195Not AvailableNegative501428 - 50208722880.9

Displaying genes 431 – 440 of 951 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.