Parvibacter caecicola strain NM48_B13 14

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Coriobacteriia

Order

Coriobacteriales

Family

Coriobacteriaceae

Genus

Parvibacter

Description

Parvibacter caecicola strain NM48_B13 14 is characterized by a single replicon, suggesting a streamlined genomic organization that may contribute to its adaptability in specific environments. Its genomic data is cataloged under the accession number SSTM00000000.1, which serves as a reference for researchers seeking to study this strain further. The singular replicon indicates that Parvibacter caecicola NM48_B13 14 may exhibit features typically associated with species that have a reduced genomic complexity, potentially allowing for efficient replication and maintenance in its ecological niche. Such adaptations could be beneficial in environments where resource availability fluctuates, enabling the organism to thrive under competitive conditions. Understanding the genetic makeup of Parvibacter caecicola NM48_B13 14 can provide insights into its ecological role, particularly in environments where it is prevalent. The study of this strain could inform broader ecological and biological principles concerning microbial interactions and adaptability. The traits of this specific strain highlight the potential for specialized functions within microbial communities, suggesting that even organisms with minimal genomic complexity can play significant roles in their ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassCoriobacteriia
OrderCoriobacteriales
FamilyCoriobacteriaceae
GenusParvibacter
SpeciesParvibacter caecicola
Strainstrain NM48_B13 14

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parvibacter caecicola strain NM48_B13 14, whole genome shotgun

Gene Summary

Adenine Count

449783 bp

Thymine Count

456625 bp

Guanine Count

763976 bp

Cytosine Count

742494 bp

Genome Length

2412878 bp

Protein-coding Genes

1821 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaE5982_02100Not AvailableNegative476736 - 47766533134.0
flavodoxin family proteinE5982_02105Not AvailableNegative477658 - 47854530824.3
tatd family deoxyribonucleaseE5982_02110Not AvailableNegative478559 - 47960238164.5
methionine--trna ligaseE5982_02115Not AvailableNegative479612 - 48119559162.8
fe-s cluster assembly scaffold protein nifuE5982_02120Not AvailableNegative481811 - 48226916336.1
cysteine desulfurase nifsE5982_02125Not AvailableNegative482364 - 48359043799.1
rrf2 family transcriptional regulatorE5982_02130Not AvailablePositive483868 - 48426914639.7
abc transporter atp-binding proteinE5982_02135Not AvailableNegative484379 - 48525431448.3
dipeptide/oligopeptide/nickel abc transporter permease/atp-binding proteinE5982_02140Not AvailableNegative485251 - 48728774200.0
abc transporter permeaseE5982_02145Not AvailableNegative487292 - 48824834579.7

Displaying genes 421 – 430 of 951 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.