Parvibacter caecicola strain NM48_B13 14

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Coriobacteriia

Order

Coriobacteriales

Family

Coriobacteriaceae

Genus

Parvibacter

Description

Parvibacter caecicola strain NM48_B13 14 is characterized by a single replicon, suggesting a streamlined genomic organization that may contribute to its adaptability in specific environments. Its genomic data is cataloged under the accession number SSTM00000000.1, which serves as a reference for researchers seeking to study this strain further. The singular replicon indicates that Parvibacter caecicola NM48_B13 14 may exhibit features typically associated with species that have a reduced genomic complexity, potentially allowing for efficient replication and maintenance in its ecological niche. Such adaptations could be beneficial in environments where resource availability fluctuates, enabling the organism to thrive under competitive conditions. Understanding the genetic makeup of Parvibacter caecicola NM48_B13 14 can provide insights into its ecological role, particularly in environments where it is prevalent. The study of this strain could inform broader ecological and biological principles concerning microbial interactions and adaptability. The traits of this specific strain highlight the potential for specialized functions within microbial communities, suggesting that even organisms with minimal genomic complexity can play significant roles in their ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassCoriobacteriia
OrderCoriobacteriales
FamilyCoriobacteriaceae
GenusParvibacter
SpeciesParvibacter caecicola
Strainstrain NM48_B13 14

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parvibacter caecicola strain NM48_B13 14, whole genome shotgun

Gene Summary

Adenine Count

449783 bp

Thymine Count

456625 bp

Guanine Count

763976 bp

Cytosine Count

742494 bp

Genome Length

2412878 bp

Protein-coding Genes

1821 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ni/fe hydrogenase subunit alphaE5982_01600Not AvailableNegative372176 - 37346546303.2
nadh:ubiquinone oxidoreductaseE5982_01605Not AvailableNegative373508 - 37427526983.7
oxidoreductaseE5982_01610Not AvailableNegative374276 - 37518734474.3
4fe-4s ferredoxinE5982_01615Not AvailableNegative375192 - 37621738471.6
ribonuclease hiiE5982_01620Not AvailableNegative376344 - 37713228027.7
50s ribosomal protein l19E5982_01625Not AvailableNegative377342 - 37768913567.4
azld domain-containing proteinE5982_01630Not AvailableNegative377855 - 37818411350.3
branched-chain amino acid abc transporter permeaseE5982_01635Not AvailableNegative378181 - 37890625223.1
hypothetical proteinE5982_01640Not AvailablePositive379108 - 37946113185.1
deoxyguanosinetriphosphate triphosphohydrolaseE5982_01645Not AvailableNegative379604 - 38064739002.1

Displaying genes 321 – 330 of 951 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.