Parvibacter caecicola strain NM48_B13 14

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Coriobacteriia

Order

Coriobacteriales

Family

Coriobacteriaceae

Genus

Parvibacter

Description

Parvibacter caecicola strain NM48_B13 14 is characterized by a single replicon, suggesting a streamlined genomic organization that may contribute to its adaptability in specific environments. Its genomic data is cataloged under the accession number SSTM00000000.1, which serves as a reference for researchers seeking to study this strain further. The singular replicon indicates that Parvibacter caecicola NM48_B13 14 may exhibit features typically associated with species that have a reduced genomic complexity, potentially allowing for efficient replication and maintenance in its ecological niche. Such adaptations could be beneficial in environments where resource availability fluctuates, enabling the organism to thrive under competitive conditions. Understanding the genetic makeup of Parvibacter caecicola NM48_B13 14 can provide insights into its ecological role, particularly in environments where it is prevalent. The study of this strain could inform broader ecological and biological principles concerning microbial interactions and adaptability. The traits of this specific strain highlight the potential for specialized functions within microbial communities, suggesting that even organisms with minimal genomic complexity can play significant roles in their ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassCoriobacteriia
OrderCoriobacteriales
FamilyCoriobacteriaceae
GenusParvibacter
SpeciesParvibacter caecicola
Strainstrain NM48_B13 14

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parvibacter caecicola strain NM48_B13 14, whole genome shotgun

Gene Summary

Adenine Count

449783 bp

Thymine Count

456625 bp

Guanine Count

763976 bp

Cytosine Count

742494 bp

Genome Length

2412878 bp

Protein-coding Genes

1821 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogenase maturation proteaseE5982_01200Not AvailableNegative276118 - 27657916775.3
viscotoxin-a3E5982_01205Not AvailableNegative276663 - 27710915816.5
duf4405 domain-containing proteinE5982_01210Not AvailableNegative277224 - 27792526397.0
nickel-dependent hydrogenase large subunitE5982_01215Not AvailableNegative277927 - 27960061591.9
twin-arginine translocation signal domain-containing proteinE5982_01220Not AvailableNegative279600 - 28088945805.5
prephenate dehydrataseE5982_01225Not AvailablePositive281227 - 28207830186.2
manganese efflux pumpE5982_01230Not AvailableNegative282101 - 28271220715.8
adenine glycosylaseE5982_01235Not AvailableNegative282814 - 28368931974.1
ribonucleotide reductase subunit alphaE5982_01240Not AvailableNegative283676 - 28513652777.2
haloacid dehalogenase-like hydrolaseE5982_01245Not AvailableNegative285156 - 28588727215.6

Displaying genes 241 – 250 of 951 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.