Escherichia coli strain Broiler parent118

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent118 is a Gram-negative, rod-shaped bacterium that is a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. This strain is capable of mobility, aided by the presence of flagella, and typically arranges itself in pairs or as single cells. E. coli Broiler parent118 has a diverse array of hosts, including Homo sapiens (humans), various livestock species like Gallus gallus (chickens), Bos taurus (cattle), and several others across multiple taxa, such as Metazoa, Aves, and Mammalia. This broad host range highlights its ecological versatility and potential for transmission between species. The strain is associated with numerous health complications, particularly in humans, where it is implicated in urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and various foodborne illnesses. Conditions such as hemorrhagic colitis and hemolytic uremic syndrome (HUS) are particularly concerning due to their severity. Notably, it has been linked to both community-acquired and nosocomial infections, reflecting its significance in public health. The biotic relationship of E. coli Broiler parent118 is characterized as free-living, indicating its ability to exist independently of a host under certain conditions. This adaptability may contribute to its persistence in various environments, thereby enhancing its potential to cause infections in both humans and animals. Overall, the strain exemplifies the complex interactions between microorganisms and their hosts, underscoring the need for ongoing surveillance and research into its pathogenicity and transmission dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent118

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent118
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent118

Gene Summary

Adenine Count

1235384 bp

Thymine Count

1238041 bp

Guanine Count

1271716 bp

Cytosine Count

1246718 bp

Genome Length

4991929 bp

Protein-coding Genes

4557 genes

Non-Coding Genes

310 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1409880 - 1409893Not Available
Gp59EYY37_06995Not AvailableNegative1411161 - 141244446269.9
hypothetical proteinEYY37_07000Not AvailablePositive1413161 - 14133587468.88
hypotheticalEYY37_07005Not AvailableNegative1413491 - 14136415452.67
Qin prophageEYY37_07010Not AvailableNegative1414179 - 141476021467.1
Qin prophageEYY37_07015Not AvailableNegative1414760 - 141580637193.8
Dna packaging proteinEYY37_07020Not AvailableNegative1415781 - 141632620472.3
hypothetical proteinEYY37_07025Not AvailablePositive1416442 - 14166999780.73
Hypothetical proteinEYY37_07030Not AvailablePositive1416715 - 14169097506.86
Bor protein precursorEYY37_07035Not AvailablePositive1417269 - 141756210414.7

Displaying genes 1 – 10 of 4867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total