Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1286712 bp
Thymine Count
1285531 bp
Guanine Count
1324715 bp
Cytosine Count
1293848 bp
Genome Length
5190906 bp
Protein-coding Genes
4652 genes
Non-Coding Genes
304 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yscq/hrcq family type iii secretion apparatus protein | EYY27_21200 | Not Available | Positive | 4296760 - 4297707 | 36195.3 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | EYY27_21205 | Not Available | Positive | 4297697 - 4298362 | 24540.5 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | EYY27_21210 | Not Available | Positive | 4298372 - 4298632 | 9430.85 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | EYY27_21215 | Not Available | Positive | 4298634 - 4299401 | 28166.7 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | EYY27_21220 | Not Available | Positive | 4299410 - 4300531 | 43357.4 |
| invasion protein | EYY27_21225 | Not Available | Negative | 4300592 - 4300885 | 11209.5 |
| helix-turn-helix transcriptional regulator | EYY27_21230 | Not Available | Negative | 4300887 - 4301387 | 19131.0 |
| prgh/eprh family type iii secretion apparatus protein | EYY27_21235 | Not Available | Positive | 4301646 - 4302827 | 45033.3 |
| type iii secretion system needle complex protein | EYY27_21240 | Not Available | Positive | 4302841 - 4303080 | 9038.44 |
| hypothetical protein | EYY27_21245 | Not Available | Positive | 4303100 - 4303432 | 12241.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





